Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 AL009178.2-201ENST00000597278 2719 ntBASIC18.11■□□□□ 0.49
RNF20Q5VTR2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 AC018529.2-202ENST00000611482 3087 ntBASIC18.11■□□□□ 0.49
RNF20Q5VTR2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.11■□□□□ 0.49
RNF20Q5VTR2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 AC140912.1-201ENST00000577171 1054 ntBASIC18.11■□□□□ 0.49
RNF20Q5VTR2 MIR4745-201ENST00000577608 62 ntBASIC18.11■□□□□ 0.49
RNF20Q5VTR2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 AL355385.1-201ENST00000606123 409 ntBASIC18.11■□□□□ 0.49
RNF20Q5VTR2 AL603764.1-201ENST00000636452 321 ntBASIC18.11■□□□□ 0.49
RNF20Q5VTR2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF20Q5VTR2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 ELK1P1-201ENST00000485699 580 ntBASIC18.1■□□□□ 0.49
RNF20Q5VTR2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 AP005019.2-201ENST00000615104 511 ntBASIC18.1■□□□□ 0.49
RNF20Q5VTR2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF20Q5VTR2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms