Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RC3H1Q5TC82 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AC090502.4-201ENST00000551714 1386 ntBASIC18.68■□□□□ 0.58
RC3H1Q5TC82 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AC092638.2-201ENST00000441105 947 ntBASIC18.68■□□□□ 0.58
RC3H1Q5TC82 DUX4L50-201ENST00000455245 715 ntBASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 NUDT4P2-201ENST00000578341 546 ntBASIC18.68■□□□□ 0.58
RC3H1Q5TC82 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AC073911.3-201ENST00000624401 631 ntBASIC18.68■□□□□ 0.58
RC3H1Q5TC82 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 MROH4P-201ENST00000431302 1578 ntBASIC18.68■□□□□ 0.58
RC3H1Q5TC82 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.68■□□□□ 0.58
RC3H1Q5TC82 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 LINC01815-202ENST00000641468 1409 ntBASIC18.67■□□□□ 0.58
RC3H1Q5TC82 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 BAK1P1-201ENST00000317045 636 ntBASIC18.67■□□□□ 0.58
RC3H1Q5TC82 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 MIR1227-201ENST00000408484 88 ntBASIC18.67■□□□□ 0.58
RC3H1Q5TC82 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 AL354861.1-201ENST00000445213 355 ntBASIC18.67■□□□□ 0.58
RC3H1Q5TC82 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 AL022334.2-201ENST00000610000 484 ntBASIC18.67■□□□□ 0.58
RC3H1Q5TC82 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.67■□□□□ 0.58
RC3H1Q5TC82 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.67■□□□□ 0.58
RC3H1Q5TC82 AC092850.2-201ENST00000623821 2697 ntBASIC18.67■□□□□ 0.58
RC3H1Q5TC82 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 MARK2P16-201ENST00000605714 1723 ntBASIC18.66■□□□□ 0.58
RC3H1Q5TC82 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 REXO1L2P-201ENST00000425429 2069 ntBASIC18.66■□□□□ 0.58
RC3H1Q5TC82 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 AL590440.2-201ENST00000641973 1595 ntBASIC18.66■□□□□ 0.58
RC3H1Q5TC82 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RC3H1Q5TC82 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms