Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 RPL18P13-201ENST00000478088 569 ntBASIC17.94■□□□□ 0.46
PDS5AQ29RF7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SNORD3B-2-202ENST00000571722 791 ntBASIC17.94■□□□□ 0.46
PDS5AQ29RF7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 AC138627.1-207ENST00000641560 1006 ntBASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.94■□□□□ 0.46
PDS5AQ29RF7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AC011742.3-201ENST00000439053 820 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AC104073.2-201ENST00000453737 312 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 IGHJ2P-201ENST00000454480 60 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AC009779.1-201ENST00000551138 283 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AC009884.2-201ENST00000603110 324 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 AC126177.1-201ENST00000547829 2218 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 FAM90A7P-201ENST00000382628 1395 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 FAM90A23P-201ENST00000400136 1395 ntBASIC17.93■□□□□ 0.46
PDS5AQ29RF7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDS5AQ29RF7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 SLC25A24P2-201ENST00000415059 510 ntBASIC17.92■□□□□ 0.46
PDS5AQ29RF7 SPTLC1P5-201ENST00000450718 252 ntBASIC17.92■□□□□ 0.46
PDS5AQ29RF7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 AC125604.1-201ENST00000496255 707 ntBASIC17.92■□□□□ 0.46
PDS5AQ29RF7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDS5AQ29RF7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms