Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.08□□□□□ -0.8
SYCNQ0VAF6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 REXO1L2P-201ENST00000425429 2069 ntBASIC10.08□□□□□ -0.8
SYCNQ0VAF6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CICP14-201ENST00000629111 2732 ntBASIC10.08□□□□□ -0.8
SYCNQ0VAF6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 LINC00528-201ENST00000600723 2160 ntBASIC10.08□□□□□ -0.8
SYCNQ0VAF6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 FGD5P1-202ENST00000614866 2498 ntBASIC10.08□□□□□ -0.8
SYCNQ0VAF6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 TSSK5P-201ENST00000423978 907 ntBASIC10.08□□□□□ -0.8
SYCNQ0VAF6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SYCNQ0VAF6 INTS4P1-203ENST00000641008 3683 ntBASIC10.08□□□□□ -0.8
SYCNQ0VAF6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 AP000845.1-201ENST00000581677 2131 ntBASIC10.07□□□□□ -0.8
SYCNQ0VAF6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 AJ011931.1-201ENST00000618749 2492 ntBASIC10.07□□□□□ -0.8
SYCNQ0VAF6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SYCNQ0VAF6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms