Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRNB3Q05901 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRNB3Q05901 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 MIR346-201ENST00000362234 95 ntBASIC14.42□□□□□ -0.1
CHRNB3Q05901 TSEN15P1-201ENST00000423257 515 ntBASIC14.42□□□□□ -0.1
CHRNB3Q05901 TIMM8BP1-201ENST00000452384 211 ntBASIC14.42□□□□□ -0.1
CHRNB3Q05901 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 AP000842.3-202ENST00000569238 1080 ntBASIC14.42□□□□□ -0.1
CHRNB3Q05901 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 AL355385.1-201ENST00000606123 409 ntBASIC14.42□□□□□ -0.1
CHRNB3Q05901 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 AC007787.1-201ENST00000588095 1583 ntBASIC14.42□□□□□ -0.1
CHRNB3Q05901 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.42□□□□□ -0.1
CHRNB3Q05901 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRNB3Q05901 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 AC079781.5-202ENST00000641784 3743 ntBASIC14.41□□□□□ -0.1
CHRNB3Q05901 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 AL355306.1-201ENST00000415580 579 ntBASIC14.41□□□□□ -0.1
CHRNB3Q05901 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 AC025678.2-201ENST00000562061 970 ntBASIC14.41□□□□□ -0.1
CHRNB3Q05901 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.41□□□□□ -0.1
CHRNB3Q05901 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRNB3Q05901 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CHRNB3Q05901 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms