Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.64□□□□□ -0.23
VBP1P61758 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.64□□□□□ -0.23
VBP1P61758 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.64□□□□□ -0.23
VBP1P61758 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.64□□□□□ -0.23
VBP1P61758 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.64□□□□□ -0.23
VBP1P61758 AC021087.4-201ENST00000563761 564 ntBASIC13.64□□□□□ -0.23
VBP1P61758 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.64□□□□□ -0.23
VBP1P61758 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VBP1P61758 AC116407.4-201ENST00000623319 1061 ntBASIC13.64□□□□□ -0.23
VBP1P61758 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.64□□□□□ -0.23
VBP1P61758 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
VBP1P61758 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 BEND3P3-201ENST00000611030 2440 ntBASIC13.64□□□□□ -0.23
VBP1P61758 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.64□□□□□ -0.23
VBP1P61758 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.64□□□□□ -0.23
VBP1P61758 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
VBP1P61758 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.64□□□□□ -0.23
VBP1P61758 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
VBP1P61758 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VBP1P61758 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 CYP4F24P-201ENST00000586049 1580 ntBASIC13.63□□□□□ -0.23
VBP1P61758 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
VBP1P61758 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 EEF1DP4-201ENST00000446006 880 ntBASIC13.63□□□□□ -0.23
VBP1P61758 SCARNA2-201ENST00000458748 420 ntBASIC13.63□□□□□ -0.23
VBP1P61758 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 FAM86EP-206ENST00000510506 987 ntBASIC13.63□□□□□ -0.23
VBP1P61758 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.63□□□□□ -0.23
VBP1P61758 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.63□□□□□ -0.23
VBP1P61758 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 AC008608.2-201ENST00000606089 416 ntBASIC13.63□□□□□ -0.23
VBP1P61758 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
VBP1P61758 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 AL031595.1-201ENST00000623969 4709 ntBASIC13.63□□□□□ -0.23
VBP1P61758 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
VBP1P61758 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.63□□□□□ -0.23
VBP1P61758 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 AL365181.3-201ENST00000605886 3222 ntBASIC13.63□□□□□ -0.23
VBP1P61758 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VBP1P61758 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VBP1P61758 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.62□□□□□ -0.23
VBP1P61758 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.62□□□□□ -0.23
VBP1P61758 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VBP1P61758 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
VBP1P61758 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.62□□□□□ -0.23
VBP1P61758 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.62□□□□□ -0.23
VBP1P61758 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VBP1P61758 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
VBP1P61758 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms