Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RPS3AP61247 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS3AP61247 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS3AP61247 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 AL139385.1-201ENST00000611744 3272 ntBASIC14.32□□□□□ -0.12
RPS3AP61247 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS3AP61247 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS3AP61247 HSPA7-201ENST00000445535 1927 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 AC140479.7-201ENST00000636301 2332 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 AC134407.2-201ENST00000625089 1978 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.31□□□□□ -0.12
RPS3AP61247 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS3AP61247 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.31□□□□□ -0.12
RPS3AP61247 UGT1A2P-201ENST00000454886 866 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.31□□□□□ -0.12
RPS3AP61247 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RPS3AP61247 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 AC044860.1-202ENST00000559481 777 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.31□□□□□ -0.12
RPS3AP61247 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS3AP61247 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.31□□□□□ -0.12
RPS3AP61247 AC074044.1-201ENST00000609673 707 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 AC008761.3-201ENST00000624803 892 ntBASIC14.31□□□□□ -0.12
RPS3AP61247 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.31□□□□□ -0.12
RPS3AP61247 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RPS3AP61247 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS3AP61247 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS3AP61247 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RPS3AP61247 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS3AP61247 AC236430.1-201ENST00000402231 743 ntBASIC14.3□□□□□ -0.12
RPS3AP61247 MRPS18AP1-201ENST00000414458 589 ntBASIC14.3□□□□□ -0.12
RPS3AP61247 AC002472.2-201ENST00000442739 958 ntBASIC14.3□□□□□ -0.12
RPS3AP61247 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS3AP61247 PHKG1P2-201ENST00000457537 863 ntBASIC14.3□□□□□ -0.12
RPS3AP61247 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS3AP61247 TIMM17BP1-201ENST00000545713 516 ntBASIC14.3□□□□□ -0.12
RPS3AP61247 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 RN7SL204P-201ENST00000582831 262 ntBASIC14.3□□□□□ -0.12
RPS3AP61247 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms