Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDC42P60953 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 SPDYE17-201ENST00000412399 783 ntBASIC13.92□□□□□ -0.18
CDC42P60953 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CDC42P60953 HIST3H2BA-201ENST00000436555 524 ntBASIC13.92□□□□□ -0.18
CDC42P60953 AC079140.1-201ENST00000508039 487 ntBASIC13.92□□□□□ -0.18
CDC42P60953 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.92□□□□□ -0.18
CDC42P60953 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.92□□□□□ -0.18
CDC42P60953 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.92□□□□□ -0.18
CDC42P60953 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.92□□□□□ -0.18
CDC42P60953 AC026120.1-201ENST00000611536 926 ntBASIC13.92□□□□□ -0.18
CDC42P60953 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.92□□□□□ -0.18
CDC42P60953 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.92□□□□□ -0.18
CDC42P60953 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDC42P60953 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 LILRP1-201ENST00000444199 1370 ntBASIC13.92□□□□□ -0.18
CDC42P60953 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42P60953 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42P60953 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42P60953 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42P60953 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CDC42P60953 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CDC42P60953 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.91□□□□□ -0.18
CDC42P60953 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.91□□□□□ -0.18
CDC42P60953 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CDC42P60953 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 AC105021.1-202ENST00000570572 669 ntBASIC13.91□□□□□ -0.18
CDC42P60953 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.91□□□□□ -0.18
CDC42P60953 AC025181.2-201ENST00000606994 802 ntBASIC13.91□□□□□ -0.18
CDC42P60953 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42P60953 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.91□□□□□ -0.18
CDC42P60953 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC42P60953 HLA-A-201ENST00000376802 1334 ntBASIC13.9□□□□□ -0.18
CDC42P60953 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDC42P60953 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDC42P60953 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CDC42P60953 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDC42P60953 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms