Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN20P56880 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN20P56880 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN20P56880 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN20P56880 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 AC063926.2-201ENST00000623766 1308 ntBASIC13.95□□□□□ -0.18
CLDN20P56880 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN20P56880 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 C1QBPP1-201ENST00000400117 770 ntBASIC13.95□□□□□ -0.18
CLDN20P56880 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
CLDN20P56880 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 AC026410.3-201ENST00000514280 936 ntBASIC13.95□□□□□ -0.18
CLDN20P56880 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN20P56880 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLDN20P56880 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLDN20P56880 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN20P56880 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN20P56880 AC107373.2-201ENST00000607735 490 ntBASIC13.95□□□□□ -0.18
CLDN20P56880 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 KRT8P22-201ENST00000562317 1415 ntBASIC13.95□□□□□ -0.18
CLDN20P56880 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN20P56880 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLDN20P56880 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN20P56880 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN20P56880 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN20P56880 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 AC148477.4-201ENST00000613430 1793 ntBASIC13.94□□□□□ -0.18
CLDN20P56880 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CLDN20P56880 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 SOCS2P1-201ENST00000417727 557 ntBASIC13.94□□□□□ -0.18
CLDN20P56880 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN20P56880 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.94□□□□□ -0.18
CLDN20P56880 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN20P56880 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.94□□□□□ -0.18
CLDN20P56880 AC239800.4-201ENST00000603712 296 ntBASIC13.94□□□□□ -0.18
CLDN20P56880 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN20P56880 CU634019.7-201ENST00000624153 1185 ntBASIC13.94□□□□□ -0.18
CLDN20P56880 FP236241.2-201ENST00000624906 1185 ntBASIC13.94□□□□□ -0.18
CLDN20P56880 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms