Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN6P56747 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 AL355334.1-201ENST00000417713 215 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN6P56747 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN6P56747 AC104784.1-201ENST00000473096 294 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN6P56747 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 AL161670.2-201ENST00000557650 1227 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN6P56747 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.5□□□□□ -0.09
CLDN6P56747 AL358472.3-201ENST00000608147 415 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 AL136301.1-201ENST00000615830 422 ntBASIC14.5□□□□□ -0.09
CLDN6P56747 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN6P56747 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN6P56747 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN6P56747 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN6P56747 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN6P56747 E2F3P2-201ENST00000447755 1422 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CLDN6P56747 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 AL359258.3-201ENST00000622910 2331 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 AL157791.1-201ENST00000553667 1699 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 AC126755.1-201ENST00000525846 6405 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 FKBP4P6-201ENST00000457486 1332 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 MST1L-201ENST00000442552 2185 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CLDN6P56747 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 HLA-K-203ENST00000430151 1046 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.49□□□□□ -0.09
CLDN6P56747 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 LINC02447-202ENST00000501888 2146 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 AC026434.2-201ENST00000506094 1078 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 AL160314.3-201ENST00000556041 767 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 RN7SL163P-201ENST00000583100 276 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 AL023803.2-201ENST00000620080 638 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 AC007718.1-201ENST00000621078 280 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 AL162426.1-201ENST00000624141 743 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 AC068587.8-201ENST00000641239 219 ntBASIC14.49□□□□□ -0.09
CLDN6P56747 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN6P56747 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN6P56747 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN6P56747 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN6P56747 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms