Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH12P55289 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH12P55289 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDH12P55289 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.18□□□□□ -0.14
CDH12P55289 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.18□□□□□ -0.14
CDH12P55289 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 AC007787.1-201ENST00000588095 1583 ntBASIC14.18□□□□□ -0.14
CDH12P55289 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDH12P55289 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CDH12P55289 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH12P55289 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 PTENP1-202ENST00000532280 3996 ntBASIC14.18□□□□□ -0.14
CDH12P55289 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH12P55289 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 AL133267.1-201ENST00000398220 340 ntBASIC14.18□□□□□ -0.14
CDH12P55289 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.18□□□□□ -0.14
CDH12P55289 MIR1233-2-201ENST00000408138 82 ntBASIC14.18□□□□□ -0.14
CDH12P55289 MIR1233-1-201ENST00000408722 82 ntBASIC14.18□□□□□ -0.14
CDH12P55289 KLF2P3-201ENST00000451977 1087 ntBASIC14.18□□□□□ -0.14
CDH12P55289 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDH12P55289 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.18□□□□□ -0.14
CDH12P55289 AC025678.2-201ENST00000562061 970 ntBASIC14.18□□□□□ -0.14
CDH12P55289 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CDH12P55289 AC004449.1-201ENST00000564240 433 ntBASIC14.18□□□□□ -0.14
CDH12P55289 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH12P55289 AC025181.2-201ENST00000606994 802 ntBASIC14.18□□□□□ -0.14
CDH12P55289 AC074044.1-201ENST00000609673 707 ntBASIC14.18□□□□□ -0.14
CDH12P55289 AC073592.8-201ENST00000624126 511 ntBASIC14.18□□□□□ -0.14
CDH12P55289 AL109936.8-201ENST00000641772 604 ntBASIC14.18□□□□□ -0.14
CDH12P55289 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH12P55289 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH12P55289 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CDH12P55289 AC138969.3-201ENST00000546612 1459 ntBASIC14.18□□□□□ -0.14
CDH12P55289 AC138932.2-201ENST00000548268 1459 ntBASIC14.18□□□□□ -0.14
CDH12P55289 AC126755.4-201ENST00000549796 1459 ntBASIC14.18□□□□□ -0.14
CDH12P55289 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH12P55289 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.18□□□□□ -0.14
CDH12P55289 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH12P55289 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH12P55289 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH12P55289 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms