Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H2P55055 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H2P55055 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NR1H2P55055 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.47□□□□□ -0.09
NR1H2P55055 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 KLF2P3-201ENST00000451977 1087 ntBASIC14.47□□□□□ -0.09
NR1H2P55055 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H2P55055 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H2P55055 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NR1H2P55055 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.47□□□□□ -0.09
NR1H2P55055 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.47□□□□□ -0.09
NR1H2P55055 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.47□□□□□ -0.09
NR1H2P55055 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H2P55055 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H2P55055 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.47□□□□□ -0.09
NR1H2P55055 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 Z82170.1-201ENST00000625081 3192 ntBASIC14.47□□□□□ -0.09
NR1H2P55055 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 AC015802.1-201ENST00000588104 1449 ntBASIC14.47□□□□□ -0.09
NR1H2P55055 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NR1H2P55055 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H2P55055 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.46□□□□□ -0.09
NR1H2P55055 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.46□□□□□ -0.09
NR1H2P55055 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 TUBB3P1-201ENST00000405796 1332 ntBASIC14.46□□□□□ -0.09
NR1H2P55055 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NR1H2P55055 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NR1H2P55055 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NR1H2P55055 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
NR1H2P55055 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 AC107890.1-201ENST00000422478 521 ntBASIC14.46□□□□□ -0.09
NR1H2P55055 FAM58DP-201ENST00000428076 619 ntBASIC14.46□□□□□ -0.09
NR1H2P55055 BASP1P1-201ENST00000430708 665 ntBASIC14.46□□□□□ -0.09
NR1H2P55055 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 AC125807.1-201ENST00000483097 614 ntBASIC14.46□□□□□ -0.09
NR1H2P55055 LINC01225-203ENST00000563550 1244 ntBASIC14.46□□□□□ -0.09
NR1H2P55055 AC051619.7-201ENST00000568314 623 ntBASIC14.46□□□□□ -0.09
NR1H2P55055 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.46□□□□□ -0.09
NR1H2P55055 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.46□□□□□ -0.09
NR1H2P55055 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.46□□□□□ -0.09
NR1H2P55055 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NR1H2P55055 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H2P55055 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms