Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.16□□□□□ -0.14
PSMD4P55036 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PSMD4P55036 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
PSMD4P55036 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 CRB3P1-201ENST00000449338 276 ntBASIC14.16□□□□□ -0.14
PSMD4P55036 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.16□□□□□ -0.14
PSMD4P55036 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.16□□□□□ -0.14
PSMD4P55036 CHCHD2P3-201ENST00000603038 451 ntBASIC14.16□□□□□ -0.14
PSMD4P55036 AC008494.3-201ENST00000606615 944 ntBASIC14.16□□□□□ -0.14
PSMD4P55036 MIR8072-201ENST00000614241 80 ntBASIC14.16□□□□□ -0.14
PSMD4P55036 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.16□□□□□ -0.14
PSMD4P55036 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.16□□□□□ -0.14
PSMD4P55036 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.16□□□□□ -0.14
PSMD4P55036 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PSMD4P55036 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.16□□□□□ -0.14
PSMD4P55036 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.16□□□□□ -0.14
PSMD4P55036 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PSMD4P55036 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.16□□□□□ -0.14
PSMD4P55036 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PSMD4P55036 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 AC093525.8-201ENST00000624099 1342 ntBASIC14.15□□□□□ -0.14
PSMD4P55036 KRT8P22-201ENST00000562317 1415 ntBASIC14.15□□□□□ -0.14
PSMD4P55036 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.15□□□□□ -0.14
PSMD4P55036 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
PSMD4P55036 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.15□□□□□ -0.14
PSMD4P55036 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.15□□□□□ -0.14
PSMD4P55036 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.15□□□□□ -0.14
PSMD4P55036 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.15□□□□□ -0.14
PSMD4P55036 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.15□□□□□ -0.14
PSMD4P55036 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.15□□□□□ -0.14
PSMD4P55036 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.15□□□□□ -0.14
PSMD4P55036 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.15□□□□□ -0.14
PSMD4P55036 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.15□□□□□ -0.14
PSMD4P55036 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PSMD4P55036 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.15□□□□□ -0.14
PSMD4P55036 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PSMD4P55036 AC013726.1-201ENST00000563747 2285 ntBASIC14.15□□□□□ -0.14
PSMD4P55036 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PSMD4P55036 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
PSMD4P55036 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.14□□□□□ -0.15
PSMD4P55036 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PSMD4P55036 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.14□□□□□ -0.15
PSMD4P55036 AP000845.1-201ENST00000581677 2131 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms