Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SMARCA4P51532 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCA4P51532 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCA4P51532 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCA4P51532 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCA4P51532 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCA4P51532 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SMARCA4P51532 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SMARCA4P51532 SURF4-203ENST00000371991 715 ntTSL 3 BASIC26.17■■□□□ 1.78
SMARCA4P51532 SCARNA12-201ENST00000459155 270 ntBASIC26.17■■□□□ 1.78
SMARCA4P51532 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
SMARCA4P51532 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SMARCA4P51532 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCA4P51532 AL133467.4-201ENST00000602953 725 ntBASIC26.17■■□□□ 1.78
SMARCA4P51532 HELLS-212ENST00000630929 400 ntTSL 5 BASIC26.17■■□□□ 1.78
SMARCA4P51532 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCA4P51532 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCA4P51532 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCA4P51532 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC26.17■■□□□ 1.78
SMARCA4P51532 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMARCA4P51532 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC26.16■■□□□ 1.78
SMARCA4P51532 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC26.16■■□□□ 1.78
SMARCA4P51532 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA4P51532 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC26.16■■□□□ 1.78
SMARCA4P51532 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
SMARCA4P51532 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA4P51532 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SMARCA4P51532 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 RN7SL494P-201ENST00000461517 304 ntBASIC26.16■■□□□ 1.78
SMARCA4P51532 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC26.16■■□□□ 1.78
SMARCA4P51532 TRMT112P3-201ENST00000580149 358 ntBASIC26.16■■□□□ 1.78
SMARCA4P51532 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA4P51532 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA4P51532 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA4P51532 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC26.16■■□□□ 1.78
SMARCA4P51532 AGGF1P1-201ENST00000509500 2073 ntBASIC26.15■■□□□ 1.78
SMARCA4P51532 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA4P51532 TEKT4P2-202ENST00000559466 1312 ntBASIC26.15■■□□□ 1.78
SMARCA4P51532 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA4P51532 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA4P51532 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SMARCA4P51532 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC26.15■■□□□ 1.78
SMARCA4P51532 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
SMARCA4P51532 AC226150.1-201ENST00000544259 466 ntBASIC26.15■■□□□ 1.78
SMARCA4P51532 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC26.15■■□□□ 1.78
SMARCA4P51532 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC26.15■■□□□ 1.78
SMARCA4P51532 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA4P51532 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC26.15■■□□□ 1.78
SMARCA4P51532 LINC02199-201ENST00000506655 2702 ntBASIC26.15■■□□□ 1.78
SMARCA4P51532 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC26.15■■□□□ 1.78
SMARCA4P51532 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA4P51532 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA4P51532 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA4P51532 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA4P51532 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC26.15■■□□□ 1.78
SMARCA4P51532 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA4P51532 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA4P51532 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA4P51532 AC098934.1-203ENST00000442868 1262 ntBASIC26.14■■□□□ 1.78
SMARCA4P51532 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA4P51532 AC026470.1-201ENST00000478038 846 ntBASIC26.14■■□□□ 1.78
SMARCA4P51532 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
SMARCA4P51532 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC26.14■■□□□ 1.78
SMARCA4P51532 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC26.14■■□□□ 1.78
SMARCA4P51532 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC26.14■■□□□ 1.78
SMARCA4P51532 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SMARCA4P51532 ST5-261ENST00000626808 1071 ntTSL 5 BASIC26.14■■□□□ 1.78
SMARCA4P51532 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA4P51532 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC26.14■■□□□ 1.78
SMARCA4P51532 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA4P51532 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC26.14■■□□□ 1.77
SMARCA4P51532 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
SMARCA4P51532 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SMARCA4P51532 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SMARCA4P51532 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
SMARCA4P51532 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCA4P51532 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC26.14■■□□□ 1.77
SMARCA4P51532 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCA4P51532 GNG10P1-201ENST00000452289 199 ntBASIC26.14■■□□□ 1.77
SMARCA4P51532 FAM86B3P-203ENST00000523992 854 ntBASIC26.14■■□□□ 1.77
SMARCA4P51532 MT2A-202ENST00000561491 581 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCA4P51532 AC006483.2-201ENST00000609813 515 ntBASIC26.14■■□□□ 1.77
SMARCA4P51532 CASP16P-204ENST00000635032 809 ntBASIC26.14■■□□□ 1.77
SMARCA4P51532 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC26.13■■□□□ 1.77
SMARCA4P51532 ZNF436-AS1-201ENST00000335648 2547 ntBASIC26.13■■□□□ 1.77
SMARCA4P51532 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA4P51532 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA4P51532 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA4P51532 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA4P51532 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCA4P51532 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA4P51532 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
SMARCA4P51532 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SMARCA4P51532 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms