Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDK7P50613 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.65■□□□□ 0.26
CDK7P50613 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDK7P50613 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.65■□□□□ 0.26
CDK7P50613 RPL5P21-201ENST00000404620 815 ntBASIC16.65■□□□□ 0.26
CDK7P50613 FAM58BP-201ENST00000439056 645 ntBASIC16.65■□□□□ 0.26
CDK7P50613 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK7P50613 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK7P50613 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK7P50613 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDK7P50613 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK7P50613 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.65■□□□□ 0.26
CDK7P50613 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK7P50613 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK7P50613 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDK7P50613 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDK7P50613 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK7P50613 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 INE2-201ENST00000630399 1874 ntBASIC16.65■□□□□ 0.26
CDK7P50613 PAUPAR-201ENST00000630360 2965 ntBASIC16.65■□□□□ 0.26
CDK7P50613 LINC02228-204ENST00000642115 2962 ntBASIC16.65■□□□□ 0.26
CDK7P50613 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK7P50613 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDK7P50613 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.64■□□□□ 0.26
CDK7P50613 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CDK7P50613 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CDK7P50613 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDK7P50613 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CDK7P50613 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK7P50613 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDK7P50613 E2F3P2-201ENST00000447755 1422 ntBASIC16.64■□□□□ 0.25
CDK7P50613 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK7P50613 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK7P50613 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK7P50613 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDK7P50613 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 VDAC1P1-201ENST00000439229 848 ntBASIC16.64■□□□□ 0.25
CDK7P50613 FGFR3P1-201ENST00000449999 601 ntBASIC16.64■□□□□ 0.25
CDK7P50613 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK7P50613 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.64■□□□□ 0.25
CDK7P50613 AC009779.1-201ENST00000551138 283 ntBASIC16.64■□□□□ 0.25
CDK7P50613 MIR4754-201ENST00000582477 89 ntBASIC16.64■□□□□ 0.25
CDK7P50613 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.64■□□□□ 0.25
CDK7P50613 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CDK7P50613 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK7P50613 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK7P50613 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDK7P50613 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDK7P50613 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDK7P50613 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK7P50613 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK7P50613 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK7P50613 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK7P50613 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDK7P50613 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDK7P50613 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK7P50613 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CDK7P50613 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 NOC2LP1-201ENST00000450578 752 ntBASIC16.63■□□□□ 0.25
CDK7P50613 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.63■□□□□ 0.25
CDK7P50613 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK7P50613 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK7P50613 NPM1P43-201ENST00000558669 786 ntBASIC16.63■□□□□ 0.25
CDK7P50613 AC138696.2-201ENST00000607376 223 ntBASIC16.63■□□□□ 0.25
CDK7P50613 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK7P50613 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CDK7P50613 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDK7P50613 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms