Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL033527.5-202ENST00000641632 1098 ntBASIC13.86□□□□□ -0.19
CENPAP49450 AC079781.4-201ENST00000641908 219 ntBASIC13.86□□□□□ -0.19
CENPAP49450 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.86□□□□□ -0.19
CENPAP49450 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CENPAP49450 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 MIR1233-2-201ENST00000408138 82 ntBASIC13.85□□□□□ -0.19
CENPAP49450 MIR1233-1-201ENST00000408722 82 ntBASIC13.85□□□□□ -0.19
CENPAP49450 RPL37AP1-201ENST00000412502 279 ntBASIC13.85□□□□□ -0.19
CENPAP49450 TSEN15P1-201ENST00000423257 515 ntBASIC13.85□□□□□ -0.19
CENPAP49450 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 DNAJB3-202ENST00000449667 1266 ntBASIC13.85□□□□□ -0.19
CENPAP49450 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 AC109322.1-201ENST00000524499 1264 ntBASIC13.85□□□□□ -0.19
CENPAP49450 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 AC015910.1-201ENST00000579400 975 ntBASIC13.85□□□□□ -0.19
CENPAP49450 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.85□□□□□ -0.19
CENPAP49450 AC027612.4-201ENST00000605371 583 ntBASIC13.85□□□□□ -0.19
CENPAP49450 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.85□□□□□ -0.19
CENPAP49450 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.85□□□□□ -0.19
CENPAP49450 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.85□□□□□ -0.19
CENPAP49450 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CENPAP49450 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CENPAP49450 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.84□□□□□ -0.19
CENPAP49450 Z97205.2-201ENST00000564697 1639 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms