Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
ARCN1P48444 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.18■□□□□ 0.02
ARCN1P48444 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.18■□□□□ 0.02
ARCN1P48444 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 KRT8P22-201ENST00000562317 1415 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ARCN1P48444 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ARCN1P48444 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 AL139094.1-201ENST00000405549 1188 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 AP006294.1-201ENST00000415407 339 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 COX5BP8-201ENST00000416911 349 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.17■□□□□ 0.02
ARCN1P48444 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.17■□□□□ 0.02
ARCN1P48444 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.17■□□□□ 0.02
ARCN1P48444 INE1-201ENST00000456273 945 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 RN7SL752P-201ENST00000463779 287 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.17■□□□□ 0.02
ARCN1P48444 AC104596.2-201ENST00000512793 793 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 AL359711.2-201ENST00000563105 872 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 DUX4L47-201ENST00000566374 394 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ARCN1P48444 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
ARCN1P48444 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 KRT8P14-201ENST00000414254 1442 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 AC097359.2-201ENST00000604992 2389 ntBASIC15.17■□□□□ 0.02
ARCN1P48444 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ARCN1P48444 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.17■□□□□ 0.02
ARCN1P48444 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 AP001267.2-201ENST00000532619 2086 ntBASIC15.16■□□□□ 0.02
ARCN1P48444 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.16■□□□□ 0.02
ARCN1P48444 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.16■□□□□ 0.02
ARCN1P48444 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ARCN1P48444 C1QBPP1-201ENST00000400117 770 ntBASIC15.16■□□□□ 0.02
ARCN1P48444 NME2P1-201ENST00000426182 414 ntBASIC15.16■□□□□ 0.02
ARCN1P48444 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ARCN1P48444 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.16■□□□□ 0.02
ARCN1P48444 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.16■□□□□ 0.02
ARCN1P48444 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ARCN1P48444 WFDC1-204ENST00000613603 549 ntBASIC15.16■□□□□ 0.02
ARCN1P48444 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ARCN1P48444 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.16■□□□□ 0.02
ARCN1P48444 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ARCN1P48444 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
ARCN1P48444 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.16■□□□□ 0.02
ARCN1P48444 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ARCN1P48444 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms