Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC6A12P48065 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 BAATP1-201ENST00000412284 1225 ntBASIC14.57□□□□□ -0.08
SLC6A12P48065 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 AP006294.1-201ENST00000415407 339 ntBASIC14.57□□□□□ -0.08
SLC6A12P48065 TLE1P1-201ENST00000422965 589 ntBASIC14.57□□□□□ -0.08
SLC6A12P48065 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC6A12P48065 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SLC6A12P48065 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 AC138761.1-201ENST00000584393 385 ntBASIC14.57□□□□□ -0.08
SLC6A12P48065 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC6A12P48065 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SLC6A12P48065 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SLC6A12P48065 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC6A12P48065 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC6A12P48065 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC6A12P48065 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC6A12P48065 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 BX640514.1-201ENST00000583223 1918 ntBASIC14.56□□□□□ -0.08
SLC6A12P48065 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 AC098614.1-201ENST00000368528 745 ntBASIC14.56□□□□□ -0.08
SLC6A12P48065 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.56□□□□□ -0.08
SLC6A12P48065 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC6A12P48065 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC6A12P48065 TPT1P11-201ENST00000458482 498 ntBASIC14.56□□□□□ -0.08
SLC6A12P48065 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.56□□□□□ -0.08
SLC6A12P48065 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC6A12P48065 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.56□□□□□ -0.08
SLC6A12P48065 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 AC025048.6-201ENST00000634326 1161 ntBASIC14.56□□□□□ -0.08
SLC6A12P48065 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 AC134312.5-201ENST00000568031 1313 ntBASIC14.56□□□□□ -0.08
SLC6A12P48065 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 AC026748.1-201ENST00000624349 3251 ntBASIC14.56□□□□□ -0.08
SLC6A12P48065 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC6A12P48065 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC6A12P48065 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SLC6A12P48065 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 AC097359.2-201ENST00000604992 2389 ntBASIC14.55□□□□□ -0.08
SLC6A12P48065 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC6A12P48065 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC6A12P48065 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms