Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 AL139094.1-201ENST00000405549 1188 ntBASIC15.86■□□□□ 0.13
SLC1A1P43005 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC1A1P43005 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC1A1P43005 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC1A1P43005 DUX4L47-201ENST00000566374 394 ntBASIC15.86■□□□□ 0.13
SLC1A1P43005 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC1A1P43005 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC1A1P43005 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC1A1P43005 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 AL390955.2-201ENST00000603032 514 ntBASIC15.86■□□□□ 0.13
SLC1A1P43005 AC099568.2-201ENST00000609194 695 ntBASIC15.86■□□□□ 0.13
SLC1A1P43005 AC007431.3-201ENST00000623221 587 ntBASIC15.86■□□□□ 0.13
SLC1A1P43005 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC1A1P43005 AL603764.1-201ENST00000636452 321 ntBASIC15.86■□□□□ 0.13
SLC1A1P43005 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC1A1P43005 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC1A1P43005 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC1A1P43005 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC1A1P43005 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC1A1P43005 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC1A1P43005 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC1A1P43005 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A1P43005 KRT8P14-201ENST00000414254 1442 ntBASIC15.85■□□□□ 0.13
SLC1A1P43005 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC1A1P43005 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
SLC1A1P43005 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC1A1P43005 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC1A1P43005 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC1A1P43005 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 SPDYE19P-201ENST00000338590 713 ntBASIC15.85■□□□□ 0.13
SLC1A1P43005 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC1A1P43005 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SLC1A1P43005 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC1A1P43005 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 AC093004.1-201ENST00000508850 424 ntBASIC15.85■□□□□ 0.13
SLC1A1P43005 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC1A1P43005 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC1A1P43005 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC1A1P43005 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 AL354702.1-201ENST00000442006 1960 ntBASIC15.85■□□□□ 0.13
SLC1A1P43005 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC1A1P43005 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SLC1A1P43005 INTS4P2-202ENST00000614726 2019 ntBASIC15.85■□□□□ 0.13
SLC1A1P43005 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SLC1A1P43005 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC1A1P43005 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC1A1P43005 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC1A1P43005 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC1A1P43005 AC134915.1-201ENST00000426461 574 ntBASIC15.84■□□□□ 0.13
SLC1A1P43005 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms