Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PRPHP41219 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PRPHP41219 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRPHP41219 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.09■□□□□ 0.33
PRPHP41219 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.09■□□□□ 0.33
PRPHP41219 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.09■□□□□ 0.33
PRPHP41219 AC010319.3-201ENST00000597028 470 ntBASIC17.09■□□□□ 0.33
PRPHP41219 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.09■□□□□ 0.33
PRPHP41219 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRPHP41219 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PRPHP41219 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.08■□□□□ 0.33
PRPHP41219 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 AC018529.2-202ENST00000611482 3087 ntBASIC17.08■□□□□ 0.33
PRPHP41219 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PRPHP41219 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PRPHP41219 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRPHP41219 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.08■□□□□ 0.33
PRPHP41219 MSTO2P-201ENST00000314835 1709 ntBASIC17.08■□□□□ 0.32
PRPHP41219 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 AC011495.1-201ENST00000498085 584 ntBASIC17.08■□□□□ 0.32
PRPHP41219 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 PTP4A1P2-201ENST00000546033 454 ntBASIC17.08■□□□□ 0.32
PRPHP41219 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.08■□□□□ 0.32
PRPHP41219 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.08■□□□□ 0.32
PRPHP41219 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRPHP41219 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.08■□□□□ 0.32
PRPHP41219 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRPHP41219 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.07■□□□□ 0.32
PRPHP41219 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPHP41219 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.07■□□□□ 0.32
PRPHP41219 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms