Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 AC004945.1-201ENST00000416738 983 ntBASIC14.87□□□□□ -0.03
TRIM23P36406 AC079178.1-201ENST00000420915 656 ntBASIC14.87□□□□□ -0.03
TRIM23P36406 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.87□□□□□ -0.03
TRIM23P36406 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 AC091271.1-201ENST00000611877 1162 ntBASIC14.87□□□□□ -0.03
TRIM23P36406 AC244157.2-201ENST00000616239 1006 ntBASIC14.87□□□□□ -0.03
TRIM23P36406 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.87□□□□□ -0.03
TRIM23P36406 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRIM23P36406 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM23P36406 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM23P36406 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM23P36406 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM23P36406 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM23P36406 MTX1P1-201ENST00000440904 838 ntBASIC14.86□□□□□ -0.03
TRIM23P36406 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM23P36406 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRIM23P36406 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM23P36406 MIR4525-201ENST00000580000 75 ntBASIC14.86□□□□□ -0.03
TRIM23P36406 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM23P36406 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM23P36406 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 KRT8P4-201ENST00000509735 1454 ntBASIC14.86□□□□□ -0.03
TRIM23P36406 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM23P36406 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM23P36406 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 AL138725.1-201ENST00000407347 1314 ntBASIC14.86□□□□□ -0.03
TRIM23P36406 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM23P36406 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRIM23P36406 AC023090.2-201ENST00000625182 2110 ntBASIC14.86□□□□□ -0.03
TRIM23P36406 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRIM23P36406 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRIM23P36406 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM23P36406 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRIM23P36406 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM23P36406 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM23P36406 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 INE2-201ENST00000630399 1874 ntBASIC14.85□□□□□ -0.03
TRIM23P36406 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms