Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN1P35523 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLCN1P35523 RN7SL589P-201ENST00000481268 310 ntBASIC17.32■□□□□ 0.36
CLCN1P35523 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.32■□□□□ 0.36
CLCN1P35523 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.32■□□□□ 0.36
CLCN1P35523 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.32■□□□□ 0.36
CLCN1P35523 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN1P35523 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLCN1P35523 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CLCN1P35523 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLCN1P35523 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CLCN1P35523 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
CLCN1P35523 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN1P35523 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN1P35523 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLCN1P35523 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCN1P35523 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCN1P35523 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.31■□□□□ 0.36
CLCN1P35523 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.31■□□□□ 0.36
CLCN1P35523 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN1P35523 AP000842.3-202ENST00000569238 1080 ntBASIC17.31■□□□□ 0.36
CLCN1P35523 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN1P35523 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCN1P35523 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLCN1P35523 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 TSN-212ENST00000536142 3328 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN1P35523 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCN1P35523 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 AC016397.2-201ENST00000624848 1985 ntBASIC17.31■□□□□ 0.36
CLCN1P35523 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CLCN1P35523 ELL2P1-201ENST00000413990 1906 ntBASIC17.31■□□□□ 0.36
CLCN1P35523 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN1P35523 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN1P35523 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN1P35523 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN1P35523 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 TIMM8BP1-201ENST00000452384 211 ntBASIC17.3■□□□□ 0.36
CLCN1P35523 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN1P35523 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN1P35523 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.3■□□□□ 0.36
CLCN1P35523 AC084121.4-201ENST00000641598 221 ntBASIC17.3■□□□□ 0.36
CLCN1P35523 AF228730.8-201ENST00000642140 221 ntBASIC17.3■□□□□ 0.36
CLCN1P35523 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN1P35523 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN1P35523 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN1P35523 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLCN1P35523 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms