Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCR1P32246 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCR1P32246 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCR1P32246 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCR1P32246 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCR1P32246 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCR1P32246 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.67■□□□□ 0.1
CCR1P32246 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.67■□□□□ 0.1
CCR1P32246 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCR1P32246 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCR1P32246 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCR1P32246 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.67■□□□□ 0.1
CCR1P32246 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCR1P32246 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCR1P32246 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 LINC00528-201ENST00000600723 2160 ntBASIC15.66■□□□□ 0.1
CCR1P32246 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCR1P32246 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.66■□□□□ 0.1
CCR1P32246 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.66■□□□□ 0.1
CCR1P32246 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 ATP5G2P4-201ENST00000442175 420 ntBASIC15.66■□□□□ 0.1
CCR1P32246 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.66■□□□□ 0.1
CCR1P32246 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.66■□□□□ 0.1
CCR1P32246 AC022210.1-201ENST00000449856 793 ntBASIC15.66■□□□□ 0.1
CCR1P32246 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.66■□□□□ 0.1
CCR1P32246 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.66■□□□□ 0.1
CCR1P32246 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 ECM1P1-201ENST00000604092 1279 ntBASIC15.66■□□□□ 0.1
CCR1P32246 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.66■□□□□ 0.1
CCR1P32246 RHOXF1P1-202ENST00000635473 501 ntBASIC15.66■□□□□ 0.1
CCR1P32246 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCR1P32246 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCR1P32246 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCR1P32246 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.66■□□□□ 0.1
CCR1P32246 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.66■□□□□ 0.1
CCR1P32246 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCR1P32246 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.65■□□□□ 0.1
CCR1P32246 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCR1P32246 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CCR1P32246 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 AC023090.2-201ENST00000625182 2110 ntBASIC15.65■□□□□ 0.1
CCR1P32246 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.65■□□□□ 0.1
CCR1P32246 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.65■□□□□ 0.1
CCR1P32246 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCR1P32246 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.65■□□□□ 0.1
CCR1P32246 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCR1P32246 POM121L8P-201ENST00000417732 1281 ntBASIC15.65■□□□□ 0.1
CCR1P32246 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.65■□□□□ 0.1
CCR1P32246 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCR1P32246 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCR1P32246 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.65■□□□□ 0.1
CCR1P32246 POM121L9P-203ENST00000441984 1285 ntBASIC15.65■□□□□ 0.1
CCR1P32246 AL590640.2-201ENST00000457038 527 ntBASIC15.65■□□□□ 0.1
CCR1P32246 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.65■□□□□ 0.1
CCR1P32246 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.65■□□□□ 0.1
CCR1P32246 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.65■□□□□ 0.1
CCR1P32246 AC078819.1-201ENST00000547454 765 ntBASIC15.65■□□□□ 0.1
CCR1P32246 AC012085.1-201ENST00000548270 765 ntBASIC15.65■□□□□ 0.1
CCR1P32246 AC079316.1-201ENST00000548397 411 ntBASIC15.65■□□□□ 0.1
CCR1P32246 AP005482.1-201ENST00000563722 1273 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms