Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ABCD3P28288 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCD3P28288 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 AC104581.4-201ENST00000623126 3052 ntBASIC13.98□□□□□ -0.17
ABCD3P28288 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCD3P28288 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCD3P28288 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 AC079776.1-201ENST00000401540 1152 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 AC016694.1-201ENST00000434179 700 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
ABCD3P28288 AC234783.1-201ENST00000441761 496 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 CROCCP4-201ENST00000457096 498 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 GPR53P-205ENST00000457298 1084 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 AC007551.1-201ENST00000457394 519 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.97□□□□□ -0.17
ABCD3P28288 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.97□□□□□ -0.17
ABCD3P28288 AC025279.2-201ENST00000569730 653 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.97□□□□□ -0.17
ABCD3P28288 LINC00528-201ENST00000600723 2160 ntBASIC13.97□□□□□ -0.17
ABCD3P28288 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCD3P28288 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCD3P28288 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCD3P28288 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.96□□□□□ -0.17
ABCD3P28288 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCD3P28288 AL009178.2-201ENST00000597278 2719 ntBASIC13.96□□□□□ -0.17
ABCD3P28288 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCD3P28288 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ABCD3P28288 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.96□□□□□ -0.17
ABCD3P28288 BOLA2P3-201ENST00000404566 256 ntBASIC13.96□□□□□ -0.17
ABCD3P28288 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCD3P28288 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms