Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD53P19397 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.85□□□□□ -0.19
CD53P19397 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.85□□□□□ -0.19
CD53P19397 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD53P19397 ELK1P1-201ENST00000485699 580 ntBASIC13.85□□□□□ -0.19
CD53P19397 AC092658.1-201ENST00000505836 891 ntBASIC13.85□□□□□ -0.19
CD53P19397 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.85□□□□□ -0.19
CD53P19397 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
CD53P19397 AC023310.3-201ENST00000557027 670 ntBASIC13.85□□□□□ -0.19
CD53P19397 AC100756.1-201ENST00000562736 682 ntBASIC13.85□□□□□ -0.19
CD53P19397 AC138749.3-201ENST00000567691 622 ntBASIC13.85□□□□□ -0.19
CD53P19397 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 CTBP2P3-201ENST00000585629 1255 ntBASIC13.85□□□□□ -0.19
CD53P19397 AC026979.3-201ENST00000607315 403 ntBASIC13.85□□□□□ -0.19
CD53P19397 AC116165.1-201ENST00000611806 668 ntBASIC13.85□□□□□ -0.19
CD53P19397 REXO1L2P-201ENST00000425429 2069 ntBASIC13.85□□□□□ -0.19
CD53P19397 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.85□□□□□ -0.19
CD53P19397 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.85□□□□□ -0.19
CD53P19397 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD53P19397 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.85□□□□□ -0.19
CD53P19397 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD53P19397 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CD53P19397 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD53P19397 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 SPDYE17-201ENST00000412399 783 ntBASIC13.84□□□□□ -0.19
CD53P19397 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
CD53P19397 AC123567.1-201ENST00000548294 1261 ntBASIC13.84□□□□□ -0.19
CD53P19397 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
CD53P19397 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.84□□□□□ -0.19
CD53P19397 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.84□□□□□ -0.19
CD53P19397 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CD53P19397 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.84□□□□□ -0.19
CD53P19397 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CD53P19397 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 BX640514.1-201ENST00000583223 1918 ntBASIC13.84□□□□□ -0.19
CD53P19397 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD53P19397 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.83□□□□□ -0.19
CD53P19397 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.83□□□□□ -0.19
CD53P19397 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD53P19397 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD53P19397 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CD53P19397 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.83□□□□□ -0.2
CD53P19397 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.83□□□□□ -0.2
CD53P19397 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.83□□□□□ -0.2
CD53P19397 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD53P19397 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD53P19397 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD53P19397 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD53P19397 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD53P19397 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.83□□□□□ -0.2
CD53P19397 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD53P19397 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms