Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CD58P19256 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.29■□□□□ 0.2
CD58P19256 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CD58P19256 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 AC134312.5-201ENST00000568031 1313 ntBASIC16.29■□□□□ 0.2
CD58P19256 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CD58P19256 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.29■□□□□ 0.2
CD58P19256 AC114812.1-204ENST00000449669 728 ntBASIC16.29■□□□□ 0.2
CD58P19256 KRT18P25-201ENST00000508931 1278 ntBASIC16.29■□□□□ 0.2
CD58P19256 AC068587.3-201ENST00000526613 355 ntBASIC16.29■□□□□ 0.2
CD58P19256 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.29■□□□□ 0.2
CD58P19256 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.29■□□□□ 0.2
CD58P19256 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.29■□□□□ 0.2
CD58P19256 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD58P19256 LRRC59-203ENST00000576448 1531 ntBASIC16.29■□□□□ 0.2
CD58P19256 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD58P19256 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CD58P19256 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD58P19256 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 AC007686.3-201ENST00000619017 3487 ntBASIC16.28■□□□□ 0.2
CD58P19256 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.28■□□□□ 0.2
CD58P19256 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 KRT8P35-201ENST00000483942 1338 ntBASIC16.28■□□□□ 0.2
CD58P19256 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.28■□□□□ 0.2
CD58P19256 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD58P19256 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CD58P19256 ACKR1-201ENST00000368121 1240 ntBASIC16.28■□□□□ 0.2
CD58P19256 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.28■□□□□ 0.2
CD58P19256 BAATP1-201ENST00000412284 1225 ntBASIC16.28■□□□□ 0.2
CD58P19256 AC005034.1-201ENST00000426657 489 ntBASIC16.28■□□□□ 0.2
CD58P19256 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.28■□□□□ 0.2
CD58P19256 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 AC022137.2-201ENST00000503482 481 ntBASIC16.28■□□□□ 0.2
CD58P19256 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.28■□□□□ 0.2
CD58P19256 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.28■□□□□ 0.2
CD58P19256 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.28■□□□□ 0.2
CD58P19256 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.28■□□□□ 0.2
CD58P19256 AC008735.3-201ENST00000596646 500 ntBASIC16.28■□□□□ 0.2
CD58P19256 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 CICP23-201ENST00000605013 2741 ntBASIC16.28■□□□□ 0.2
CD58P19256 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD58P19256 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD58P19256 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD58P19256 KRT8P14-201ENST00000414254 1442 ntBASIC16.28■□□□□ 0.2
CD58P19256 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.28■□□□□ 0.2
CD58P19256 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CD58P19256 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.27■□□□□ 0.2
CD58P19256 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms