Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 AC015922.1-201ENST00000421102 1152 ntBASIC15.26■□□□□ 0.03
KRT4P19013 MKNK2P1-201ENST00000437526 628 ntBASIC15.26■□□□□ 0.03
KRT4P19013 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT4P19013 AC040169.1-201ENST00000565382 521 ntBASIC15.26■□□□□ 0.03
KRT4P19013 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT4P19013 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 AC022145.2-201ENST00000598203 171 ntBASIC15.26■□□□□ 0.03
KRT4P19013 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT4P19013 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.26■□□□□ 0.03
KRT4P19013 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
KRT4P19013 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 AL121723.1-201ENST00000445194 1519 ntBASIC15.26■□□□□ 0.03
KRT4P19013 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT4P19013 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KRT4P19013 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT4P19013 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT4P19013 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 AC089987.1-201ENST00000551654 2209 ntBASIC15.25■□□□□ 0.03
KRT4P19013 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
KRT4P19013 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 HTR5BP-201ENST00000430851 1154 ntBASIC15.25■□□□□ 0.03
KRT4P19013 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 KRT18P43-201ENST00000469825 1281 ntBASIC15.25■□□□□ 0.03
KRT4P19013 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT4P19013 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.25■□□□□ 0.03
KRT4P19013 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT4P19013 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 AL079307.3-201ENST00000556114 283 ntBASIC15.25■□□□□ 0.03
KRT4P19013 AC120114.3-201ENST00000611923 658 ntBASIC15.25■□□□□ 0.03
KRT4P19013 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT4P19013 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 AC105339.1-204ENST00000636249 355 ntBASIC15.25■□□□□ 0.03
KRT4P19013 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT4P19013 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT4P19013 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT4P19013 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms