Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.38■□□□□ 0.85
ATF3P18847 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 KRT17P5-201ENST00000332088 839 ntBASIC20.38■□□□□ 0.85
ATF3P18847 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.38■□□□□ 0.85
ATF3P18847 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC20.38■□□□□ 0.85
ATF3P18847 RPL35P9-201ENST00000446059 350 ntBASIC20.38■□□□□ 0.85
ATF3P18847 GCOM2-201ENST00000509133 1104 ntBASIC20.38■□□□□ 0.85
ATF3P18847 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.38■□□□□ 0.85
ATF3P18847 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.38■□□□□ 0.85
ATF3P18847 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.38■□□□□ 0.85
ATF3P18847 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
ATF3P18847 PLS3-210ENST00000626746 216 ntTSL 4 BASIC20.38■□□□□ 0.85
ATF3P18847 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATF3P18847 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ATF3P18847 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATF3P18847 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.37■□□□□ 0.85
ATF3P18847 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.37■□□□□ 0.85
ATF3P18847 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 AC009090.5-201ENST00000624886 2285 ntBASIC20.37■□□□□ 0.85
ATF3P18847 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.37■□□□□ 0.85
ATF3P18847 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.37■□□□□ 0.85
ATF3P18847 RN7SKP109-201ENST00000410592 316 ntBASIC20.37■□□□□ 0.85
ATF3P18847 HNRNPA1P27-201ENST00000412087 955 ntBASIC20.37■□□□□ 0.85
ATF3P18847 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.37■□□□□ 0.85
ATF3P18847 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC20.37■□□□□ 0.85
ATF3P18847 AC007952.4-201ENST00000573866 637 ntBASIC20.37■□□□□ 0.85
ATF3P18847 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
ATF3P18847 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATF3P18847 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.37■□□□□ 0.85
ATF3P18847 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATF3P18847 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.37■□□□□ 0.85
ATF3P18847 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATF3P18847 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.36■□□□□ 0.85
ATF3P18847 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATF3P18847 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
ATF3P18847 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATF3P18847 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ATF3P18847 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 MRPL37P1-201ENST00000592451 1337 ntBASIC20.36■□□□□ 0.85
ATF3P18847 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.36■□□□□ 0.85
ATF3P18847 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.36■□□□□ 0.85
ATF3P18847 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.36■□□□□ 0.85
ATF3P18847 OR2R1P-201ENST00000441404 914 ntBASIC20.36■□□□□ 0.85
ATF3P18847 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 AC244197.1-201ENST00000456494 951 ntBASIC20.36■□□□□ 0.85
ATF3P18847 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC20.36■□□□□ 0.85
ATF3P18847 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC20.36■□□□□ 0.85
ATF3P18847 PGAM1P12-201ENST00000505622 748 ntBASIC20.36■□□□□ 0.85
ATF3P18847 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC20.36■□□□□ 0.85
ATF3P18847 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 AC140113.1-201ENST00000603467 169 ntBASIC20.36■□□□□ 0.85
ATF3P18847 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.36■□□□□ 0.85
ATF3P18847 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.36■□□□□ 0.85
ATF3P18847 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 AC021305.1-201ENST00000520656 1514 ntBASIC20.36■□□□□ 0.85
ATF3P18847 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.36■□□□□ 0.85
ATF3P18847 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATF3P18847 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.36■□□□□ 0.85
ATF3P18847 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.36■□□□□ 0.85
ATF3P18847 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms