Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 AC211486.1-202ENST00000416371 468 ntBASIC13.36□□□□□ -0.27
ATF1P18846 UPF3AP3-201ENST00000420996 769 ntBASIC13.36□□□□□ -0.27
ATF1P18846 BX842568.4-201ENST00000421222 227 ntBASIC13.36□□□□□ -0.27
ATF1P18846 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ATF1P18846 AC211476.1-201ENST00000503899 468 ntBASIC13.36□□□□□ -0.27
ATF1P18846 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.36□□□□□ -0.27
ATF1P18846 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.36□□□□□ -0.27
ATF1P18846 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 AL033527.5-202ENST00000641632 1098 ntBASIC13.36□□□□□ -0.27
ATF1P18846 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.36□□□□□ -0.27
ATF1P18846 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.36□□□□□ -0.27
ATF1P18846 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 AC007787.1-201ENST00000588095 1583 ntBASIC13.36□□□□□ -0.27
ATF1P18846 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 C8orf49-201ENST00000525043 1968 ntBASIC13.36□□□□□ -0.27
ATF1P18846 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.36□□□□□ -0.27
ATF1P18846 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.35□□□□□ -0.27
ATF1P18846 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.35□□□□□ -0.27
ATF1P18846 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.35□□□□□ -0.27
ATF1P18846 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.35□□□□□ -0.27
ATF1P18846 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ATF1P18846 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 AL133267.1-201ENST00000398220 340 ntBASIC13.35□□□□□ -0.27
ATF1P18846 AL080243.2-201ENST00000418783 582 ntBASIC13.35□□□□□ -0.27
ATF1P18846 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ATF1P18846 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.35□□□□□ -0.27
ATF1P18846 AP000347.1-202ENST00000435868 847 ntBASIC13.35□□□□□ -0.27
ATF1P18846 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ATF1P18846 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.35□□□□□ -0.27
ATF1P18846 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.35□□□□□ -0.27
ATF1P18846 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ATF1P18846 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.35□□□□□ -0.27
ATF1P18846 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.35□□□□□ -0.27
ATF1P18846 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 AC025048.3-201ENST00000590609 569 ntBASIC13.35□□□□□ -0.27
ATF1P18846 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.35□□□□□ -0.27
ATF1P18846 AC005702.4-201ENST00000618393 416 ntBASIC13.35□□□□□ -0.27
ATF1P18846 LINC00628-201ENST00000628516 1289 ntBASIC13.35□□□□□ -0.27
ATF1P18846 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.35□□□□□ -0.27
ATF1P18846 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ATF1P18846 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ATF1P18846 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 AC067750.1-201ENST00000608826 6545 ntBASIC13.35□□□□□ -0.27
ATF1P18846 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ATF1P18846 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 AC055811.4-201ENST00000624039 1754 ntBASIC13.35□□□□□ -0.27
ATF1P18846 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.35□□□□□ -0.27
ATF1P18846 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATF1P18846 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms