Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 AC104457.1-201ENST00000401024 814 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 AC004066.1-201ENST00000502488 802 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 AC104596.2-201ENST00000512793 793 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.11□□□□□ -0.15
UBL4AP11441 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.11□□□□□ -0.15
UBL4AP11441 SAMD11P1-201ENST00000571429 661 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.11□□□□□ -0.15
UBL4AP11441 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 AL132655.2-201ENST00000596276 594 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 REXO1L4P-201ENST00000605109 1937 ntBASIC14.11□□□□□ -0.15
UBL4AP11441 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBL4AP11441 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBL4AP11441 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UBL4AP11441 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 LINC00528-201ENST00000600723 2160 ntBASIC14.1□□□□□ -0.15
UBL4AP11441 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 AC011700.1-201ENST00000610409 2627 ntBASIC14.1□□□□□ -0.15
UBL4AP11441 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 VDAC1P7-201ENST00000462417 847 ntBASIC14.1□□□□□ -0.15
UBL4AP11441 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.1□□□□□ -0.15
UBL4AP11441 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.1□□□□□ -0.15
UBL4AP11441 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.1□□□□□ -0.15
UBL4AP11441 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UBL4AP11441 AC107373.2-201ENST00000607735 490 ntBASIC14.1□□□□□ -0.15
UBL4AP11441 AC093726.1-201ENST00000608064 963 ntBASIC14.1□□□□□ -0.15
UBL4AP11441 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 AC027601.5-201ENST00000624065 2482 ntBASIC14.1□□□□□ -0.15
UBL4AP11441 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.1□□□□□ -0.15
UBL4AP11441 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
UBL4AP11441 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBL4AP11441 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBL4AP11441 AL391825.1-201ENST00000457671 1364 ntBASIC14.09□□□□□ -0.15
UBL4AP11441 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms