Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARP1P09874 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARP1P09874 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PARP1P09874 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.56■□□□□ 0.4
PARP1P09874 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PARP1P09874 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARP1P09874 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PARP1P09874 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
PARP1P09874 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PARP1P09874 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PARP1P09874 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PARP1P09874 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.55■□□□□ 0.4
PARP1P09874 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.55■□□□□ 0.4
PARP1P09874 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.55■□□□□ 0.4
PARP1P09874 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.55■□□□□ 0.4
PARP1P09874 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 FAM8A4P-201ENST00000435433 1213 ntBASIC17.55■□□□□ 0.4
PARP1P09874 AC007274.1-201ENST00000439805 662 ntBASIC17.55■□□□□ 0.4
PARP1P09874 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.55■□□□□ 0.4
PARP1P09874 RNA5SP412-201ENST00000516234 123 ntBASIC17.55■□□□□ 0.4
PARP1P09874 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.55■□□□□ 0.4
PARP1P09874 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.55■□□□□ 0.4
PARP1P09874 AC138466.3-201ENST00000619983 221 ntBASIC17.55■□□□□ 0.4
PARP1P09874 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.55■□□□□ 0.4
PARP1P09874 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PARP1P09874 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PARP1P09874 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PARP1P09874 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PARP1P09874 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.54■□□□□ 0.4
PARP1P09874 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.54■□□□□ 0.4
PARP1P09874 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PARP1P09874 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.54■□□□□ 0.4
PARP1P09874 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PARP1P09874 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 MESTP3-201ENST00000503460 968 ntBASIC17.54■□□□□ 0.4
PARP1P09874 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 AL583810.1-201ENST00000553344 1045 ntBASIC17.54■□□□□ 0.4
PARP1P09874 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.54■□□□□ 0.4
PARP1P09874 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.54■□□□□ 0.4
PARP1P09874 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.54■□□□□ 0.4
PARP1P09874 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.54■□□□□ 0.4
PARP1P09874 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 AGAP7P-201ENST00000582299 2062 ntBASIC17.54■□□□□ 0.4
PARP1P09874 AGAP14-201ENST00000624701 2060 ntBASIC17.54■□□□□ 0.4
PARP1P09874 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.54■□□□□ 0.4
PARP1P09874 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.54■□□□□ 0.4
PARP1P09874 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARP1P09874 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms