Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.62■□□□□ 0.25
CLTAP09496 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLTAP09496 ATP5G2P4-201ENST00000442175 420 ntBASIC16.62■□□□□ 0.25
CLTAP09496 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.62■□□□□ 0.25
CLTAP09496 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLTAP09496 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.62■□□□□ 0.25
CLTAP09496 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.62■□□□□ 0.25
CLTAP09496 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.62■□□□□ 0.25
CLTAP09496 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.62■□□□□ 0.25
CLTAP09496 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.62■□□□□ 0.25
CLTAP09496 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 MIR600HG-201ENST00000449175 5984 ntBASIC16.62■□□□□ 0.25
CLTAP09496 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.62■□□□□ 0.25
CLTAP09496 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.62■□□□□ 0.25
CLTAP09496 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLTAP09496 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLTAP09496 KRT8P14-201ENST00000414254 1442 ntBASIC16.62■□□□□ 0.25
CLTAP09496 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLTAP09496 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.61■□□□□ 0.25
CLTAP09496 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLTAP09496 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CLTAP09496 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLTAP09496 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLTAP09496 AC007551.1-201ENST00000457394 519 ntBASIC16.61■□□□□ 0.25
CLTAP09496 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 AC017083.2-201ENST00000608069 979 ntBASIC16.61■□□□□ 0.25
CLTAP09496 AC145423.3-201ENST00000615987 467 ntBASIC16.61■□□□□ 0.25
CLTAP09496 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.61■□□□□ 0.25
CLTAP09496 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.61■□□□□ 0.25
CLTAP09496 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLTAP09496 AC012508.2-201ENST00000567613 1472 ntBASIC16.61■□□□□ 0.25
CLTAP09496 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLTAP09496 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.6■□□□□ 0.25
CLTAP09496 MIR1909-201ENST00000411312 80 ntBASIC16.6■□□□□ 0.25
CLTAP09496 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 AC016694.1-201ENST00000434179 700 ntBASIC16.6■□□□□ 0.25
CLTAP09496 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.6■□□□□ 0.25
CLTAP09496 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLTAP09496 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 GNRHR2-203ENST00000581100 1187 ntBASIC16.6■□□□□ 0.25
CLTAP09496 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms