Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.23■□□□□ 0.51
APPP05067 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.23■□□□□ 0.51
APPP05067 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APPP05067 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
APPP05067 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APPP05067 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
APPP05067 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APPP05067 KRT8P14-201ENST00000414254 1442 ntBASIC18.23■□□□□ 0.51
APPP05067 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
APPP05067 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
APPP05067 AC006486.2-201ENST00000624246 2199 ntBASIC18.23■□□□□ 0.51
APPP05067 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
APPP05067 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
APPP05067 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 AL122018.1-201ENST00000446607 2310 ntBASIC18.22■□□□□ 0.51
APPP05067 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
APPP05067 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
APPP05067 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.22■□□□□ 0.51
APPP05067 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.22■□□□□ 0.51
APPP05067 ACTBP8-201ENST00000403258 1108 ntBASIC18.22■□□□□ 0.51
APPP05067 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 C2orf27AP3-201ENST00000434123 579 ntBASIC18.22■□□□□ 0.51
APPP05067 AC016694.1-201ENST00000434179 700 ntBASIC18.22■□□□□ 0.51
APPP05067 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.22■□□□□ 0.51
APPP05067 IGHV3-71-201ENST00000523324 359 ntBASIC18.22■□□□□ 0.51
APPP05067 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.22■□□□□ 0.51
APPP05067 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.22■□□□□ 0.51
APPP05067 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.22■□□□□ 0.51
APPP05067 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.22■□□□□ 0.51
APPP05067 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
APPP05067 AL354718.3-201ENST00000616414 581 ntBASIC18.22■□□□□ 0.51
APPP05067 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
APPP05067 CR382287.1-201ENST00000623954 586 ntBASIC18.22■□□□□ 0.51
APPP05067 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
APPP05067 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.22■□□□□ 0.51
APPP05067 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APPP05067 MROH4P-201ENST00000431302 1578 ntBASIC18.21■□□□□ 0.51
APPP05067 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
APPP05067 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.21■□□□□ 0.51
APPP05067 REXO1L2P-201ENST00000425429 2069 ntBASIC18.21■□□□□ 0.51
APPP05067 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
APPP05067 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.21■□□□□ 0.51
APPP05067 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
APPP05067 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.21■□□□□ 0.51
APPP05067 ARSEP1-201ENST00000420443 635 ntBASIC18.21■□□□□ 0.51
APPP05067 HLA-K-203ENST00000430151 1046 ntBASIC18.21■□□□□ 0.51
APPP05067 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
APPP05067 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.21■□□□□ 0.51
APPP05067 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.21■□□□□ 0.51
APPP05067 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.21■□□□□ 0.51
APPP05067 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.21■□□□□ 0.51
APPP05067 AC017083.2-201ENST00000608069 979 ntBASIC18.21■□□□□ 0.51
APPP05067 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.21■□□□□ 0.51
APPP05067 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.21■□□□□ 0.51
APPP05067 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
APPP05067 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.21■□□□□ 0.51
APPP05067 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.21■□□□□ 0.51
APPP05067 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
APPP05067 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
APPP05067 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
APPP05067 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
APPP05067 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC18.2■□□□□ 0.5
APPP05067 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
APPP05067 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
APPP05067 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms