Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 AC092337.1-201ENST00000568699 1129 ntBASIC13.9□□□□□ -0.18
HIST1H2ABP04908 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 AC131212.3-201ENST00000624087 4219 ntBASIC13.9□□□□□ -0.18
HIST1H2ABP04908 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 REXO1L2P-201ENST00000425429 2069 ntBASIC13.9□□□□□ -0.18
HIST1H2ABP04908 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 FGD5P1-202ENST00000614866 2498 ntBASIC13.9□□□□□ -0.18
HIST1H2ABP04908 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 AC139749.1-202ENST00000617529 3139 ntBASIC13.9□□□□□ -0.18
HIST1H2ABP04908 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 CICP23-201ENST00000605013 2741 ntBASIC13.9□□□□□ -0.18
HIST1H2ABP04908 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST1H2ABP04908 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HIST1H2ABP04908 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
HIST1H2ABP04908 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HIST1H2ABP04908 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HIST1H2ABP04908 AJ011931.1-201ENST00000618749 2492 ntBASIC13.89□□□□□ -0.19
HIST1H2ABP04908 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.89□□□□□ -0.19
HIST1H2ABP04908 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 AC000095.1-201ENST00000603208 874 ntBASIC13.89□□□□□ -0.19
HIST1H2ABP04908 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HIST1H2ABP04908 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H2ABP04908 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST1H2ABP04908 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H2ABP04908 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H2ABP04908 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H2ABP04908 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST1H2ABP04908 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HIST1H2ABP04908 AP000845.1-201ENST00000581677 2131 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms