Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
BEST1O76090 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST1O76090 TNRC18P2-201ENST00000417666 2714 ntBASIC15.83■□□□□ 0.12
BEST1O76090 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 AP000593.2-201ENST00000542775 1433 ntBASIC15.83■□□□□ 0.12
BEST1O76090 KRT8P4-201ENST00000509735 1454 ntBASIC15.83■□□□□ 0.12
BEST1O76090 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.83■□□□□ 0.12
BEST1O76090 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.83■□□□□ 0.12
BEST1O76090 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BEST1O76090 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST1O76090 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
BEST1O76090 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.82■□□□□ 0.12
BEST1O76090 MIR4683-201ENST00000579659 81 ntBASIC15.82■□□□□ 0.12
BEST1O76090 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.82■□□□□ 0.12
BEST1O76090 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 AL138725.1-201ENST00000407347 1314 ntBASIC15.82■□□□□ 0.12
BEST1O76090 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
BEST1O76090 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST1O76090 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST1O76090 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
BEST1O76090 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST1O76090 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST1O76090 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST1O76090 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST1O76090 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST1O76090 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
BEST1O76090 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BEST1O76090 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 RN7SKP175-201ENST00000408472 289 ntBASIC15.81■□□□□ 0.12
BEST1O76090 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 AC004945.1-201ENST00000416738 983 ntBASIC15.81■□□□□ 0.12
BEST1O76090 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 HOMER2P2-201ENST00000451621 847 ntBASIC15.81■□□□□ 0.12
BEST1O76090 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
BEST1O76090 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms