Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.4□□□□□ -0.1
SCN2BO60939 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SCN2BO60939 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SCN2BO60939 HSPA7-201ENST00000445535 1927 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SCN2BO60939 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 MIR943-201ENST00000401286 94 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.39□□□□□ -0.11
SCN2BO60939 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.39□□□□□ -0.11
SCN2BO60939 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.39□□□□□ -0.11
SCN2BO60939 FAM86GP-201ENST00000448322 971 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.39□□□□□ -0.11
SCN2BO60939 AC004890.2-204ENST00000481968 304 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 AC026410.3-201ENST00000514280 936 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.39□□□□□ -0.11
SCN2BO60939 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 AL662799.1-202ENST00000614205 422 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 AC139530.3-201ENST00000620344 690 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 AC023090.2-201ENST00000625182 2110 ntBASIC14.39□□□□□ -0.11
SCN2BO60939 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SCN2BO60939 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.39□□□□□ -0.11
SCN2BO60939 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.39□□□□□ -0.11
SCN2BO60939 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN2BO60939 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 INTS4P1-203ENST00000641008 3683 ntBASIC14.38□□□□□ -0.11
SCN2BO60939 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 AC027601.5-201ENST00000624065 2482 ntBASIC14.38□□□□□ -0.11
SCN2BO60939 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SCN2BO60939 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.38□□□□□ -0.11
SCN2BO60939 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.38□□□□□ -0.11
SCN2BO60939 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.38□□□□□ -0.11
SCN2BO60939 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.38□□□□□ -0.11
SCN2BO60939 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.38□□□□□ -0.11
SCN2BO60939 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.38□□□□□ -0.11
SCN2BO60939 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.38□□□□□ -0.11
SCN2BO60939 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.38□□□□□ -0.11
SCN2BO60939 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.38□□□□□ -0.11
SCN2BO60939 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SCN2BO60939 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 420.8 ms