Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 FTH1P22-201ENST00000456305 520 ntBASIC11.84□□□□□ -0.51
CUBNO60494 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 AL451007.2-201ENST00000632004 563 ntBASIC11.84□□□□□ -0.51
CUBNO60494 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.84□□□□□ -0.51
CUBNO60494 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.84□□□□□ -0.51
CUBNO60494 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.84□□□□□ -0.51
CUBNO60494 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 AL138725.1-201ENST00000407347 1314 ntBASIC11.84□□□□□ -0.51
CUBNO60494 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC11.84□□□□□ -0.51
CUBNO60494 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 AC026470.1-201ENST00000478038 846 ntBASIC11.84□□□□□ -0.51
CUBNO60494 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.84□□□□□ -0.51
CUBNO60494 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 AC069224.1-201ENST00000566372 1715 ntBASIC11.84□□□□□ -0.51
CUBNO60494 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC11.84□□□□□ -0.51
CUBNO60494 BANF1P3-201ENST00000412556 261 ntBASIC11.84□□□□□ -0.51
CUBNO60494 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC11.84□□□□□ -0.51
CUBNO60494 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 AC093826.1-201ENST00000508655 993 ntBASIC11.84□□□□□ -0.51
CUBNO60494 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC11.84□□□□□ -0.51
CUBNO60494 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.84□□□□□ -0.51
CUBNO60494 MT3-203ENST00000565838 421 ntTSL 3 BASIC11.84□□□□□ -0.51
CUBNO60494 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC11.84□□□□□ -0.51
CUBNO60494 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11.84□□□□□ -0.51
CUBNO60494 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CUBNO60494 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.83□□□□□ -0.51
CUBNO60494 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CUBNO60494 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CUBNO60494 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.83□□□□□ -0.52
CUBNO60494 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.83□□□□□ -0.52
CUBNO60494 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CUBNO60494 AC068867.1-201ENST00000559855 150 ntBASIC11.83□□□□□ -0.52
CUBNO60494 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.83□□□□□ -0.52
CUBNO60494 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 AL645933.1-201ENST00000440087 609 ntBASIC11.83□□□□□ -0.52
CUBNO60494 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 TREHP1-201ENST00000531328 465 ntBASIC11.83□□□□□ -0.52
CUBNO60494 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 AL513523.2-202ENST00000427283 2040 ntBASIC11.83□□□□□ -0.52
CUBNO60494 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CUBNO60494 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 GCSHP3-201ENST00000431120 391 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms