Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AL109809.1-201ENST00000418979 1367 ntBASIC20.34■□□□□ 0.85
CHD2O14647 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CHD2O14647 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD2O14647 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD2O14647 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC20.33■□□□□ 0.85
CHD2O14647 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD2O14647 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.33■□□□□ 0.85
CHD2O14647 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD2O14647 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD2O14647 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD2O14647 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD2O14647 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD2O14647 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHD2O14647 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD2O14647 RN7SL582P-201ENST00000491078 279 ntBASIC20.33■□□□□ 0.85
CHD2O14647 MT2A-202ENST00000561491 581 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD2O14647 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC20.33■□□□□ 0.85
CHD2O14647 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD2O14647 ENPP7P8-202ENST00000527856 1345 ntBASIC20.33■□□□□ 0.84
CHD2O14647 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD2O14647 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC20.33■□□□□ 0.84
CHD2O14647 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
CHD2O14647 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD2O14647 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC20.33■□□□□ 0.84
CHD2O14647 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.33■□□□□ 0.84
CHD2O14647 AGGF1P1-201ENST00000509500 2073 ntBASIC20.33■□□□□ 0.84
CHD2O14647 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD2O14647 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD2O14647 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.84
CHD2O14647 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD2O14647 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 AC139712.1-201ENST00000378256 1875 ntBASIC20.32■□□□□ 0.84
CHD2O14647 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 AC106827.1-201ENST00000366454 431 ntBASIC20.32■□□□□ 0.84
CHD2O14647 MIR1301-201ENST00000408518 82 ntBASIC20.32■□□□□ 0.84
CHD2O14647 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 AL929302.1-201ENST00000426556 871 ntBASIC20.32■□□□□ 0.84
CHD2O14647 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 GNG10P1-201ENST00000452289 199 ntBASIC20.32■□□□□ 0.84
CHD2O14647 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 RNA5SP406-201ENST00000516106 112 ntBASIC20.32■□□□□ 0.84
CHD2O14647 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD2O14647 NT5C-204ENST00000578337 582 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 AP005212.2-201ENST00000584979 510 ntBASIC20.32■□□□□ 0.84
CHD2O14647 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD2O14647 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD2O14647 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 LINC00244-201ENST00000625073 613 ntBASIC20.32■□□□□ 0.84
CHD2O14647 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD2O14647 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHD2O14647 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHD2O14647 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 HNRNPA1P58-201ENST00000403629 610 ntBASIC20.32■□□□□ 0.84
CHD2O14647 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD2O14647 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.32■□□□□ 0.84
CHD2O14647 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD2O14647 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD2O14647 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD2O14647 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC20.32■□□□□ 0.84
CHD2O14647 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD2O14647 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD2O14647 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD2O14647 AC008972.2-201ENST00000606587 494 ntBASIC20.32■□□□□ 0.84
CHD2O14647 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD2O14647 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD2O14647 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD2O14647 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHD2O14647 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CHD2O14647 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHD2O14647 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHD2O14647 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC20.31■□□□□ 0.84
CHD2O14647 RPL3P5-201ENST00000441645 1232 ntBASIC20.31■□□□□ 0.84
CHD2O14647 AC098934.1-203ENST00000442868 1262 ntBASIC20.31■□□□□ 0.84
CHD2O14647 AC006529.1-201ENST00000459978 637 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms