Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 AC011495.1-201ENST00000498085 584 ntBASIC15.21■□□□□ 0.03
CFAP99D6REC4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.21■□□□□ 0.03
CFAP99D6REC4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 CTBP2P3-201ENST00000585629 1255 ntBASIC15.21■□□□□ 0.03
CFAP99D6REC4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CFAP99D6REC4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CFAP99D6REC4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CFAP99D6REC4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.21■□□□□ 0.02
CFAP99D6REC4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.21■□□□□ 0.02
CFAP99D6REC4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CFAP99D6REC4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.21■□□□□ 0.02
CFAP99D6REC4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CFAP99D6REC4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CFAP99D6REC4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CFAP99D6REC4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CFAP99D6REC4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 MROH4P-201ENST00000431302 1578 ntBASIC15.2■□□□□ 0.02
CFAP99D6REC4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 DGCR5-201ENST00000399539 862 ntBASIC15.2■□□□□ 0.02
CFAP99D6REC4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 WFDC1-204ENST00000613603 549 ntBASIC15.2■□□□□ 0.02
CFAP99D6REC4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 CU634019.7-201ENST00000624153 1185 ntBASIC15.2■□□□□ 0.02
CFAP99D6REC4 FP236241.2-201ENST00000624906 1185 ntBASIC15.2■□□□□ 0.02
CFAP99D6REC4 AC025048.6-201ENST00000634326 1161 ntBASIC15.2■□□□□ 0.02
CFAP99D6REC4 AL033527.5-201ENST00000641382 801 ntBASIC15.2■□□□□ 0.02
CFAP99D6REC4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CFAP99D6REC4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP99D6REC4 AC007787.1-201ENST00000588095 1583 ntBASIC15.19■□□□□ 0.02
CFAP99D6REC4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP99D6REC4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP99D6REC4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms