Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 ME2P1-201ENST00000426028 1970 ntBASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.09□□□□□ -0.15
C1QTNF9BB2RNN3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C1QTNF9BB2RNN3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
C1QTNF9BB2RNN3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C1QTNF9BB2RNN3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C1QTNF9BB2RNN3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 AL391005.1-201ENST00000623953 2435 ntBASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 ABHD17AP9-201ENST00000561925 548 ntBASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 AL645728.2-202ENST00000641679 227 ntBASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 AC009093.2-202ENST00000620513 2079 ntBASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C1QTNF9BB2RNN3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.07□□□□□ -0.16
C1QTNF9BB2RNN3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C1QTNF9BB2RNN3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.06□□□□□ -0.16
C1QTNF9BB2RNN3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C1QTNF9BB2RNN3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.06□□□□□ -0.16
C1QTNF9BB2RNN3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.06□□□□□ -0.16
C1QTNF9BB2RNN3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C1QTNF9BB2RNN3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms