Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 MEP1AP4-201ENST00000423244 1087 ntBASIC12.23□□□□□ -0.45
SRRM4A7MD48 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 BRI3BPP1-201ENST00000594224 787 ntBASIC12.23□□□□□ -0.45
SRRM4A7MD48 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SRRM4A7MD48 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.23□□□□□ -0.45
SRRM4A7MD48 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AC023090.2-201ENST00000625182 2110 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AP001267.2-201ENST00000532619 2086 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AL645937.2-201ENST00000396808 931 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 CYMP-203ENST00000474680 1263 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 RRP7BP-205ENST00000566851 833 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AC093813.1-201ENST00000605066 256 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SRRM4A7MD48 AC117489.1-201ENST00000625169 3217 ntBASIC12.22□□□□□ -0.45
SRRM4A7MD48 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SRRM4A7MD48 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms