Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.66□□□□□ -0.7
LINC01546A6NGU7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 TMPOP1-202ENST00000424642 1267 ntBASIC10.66□□□□□ -0.7
LINC01546A6NGU7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 AC009947.1-201ENST00000444350 727 ntBASIC10.66□□□□□ -0.7
LINC01546A6NGU7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 AC093827.2-201ENST00000512654 315 ntBASIC10.66□□□□□ -0.7
LINC01546A6NGU7 KRT19P2-202ENST00000557173 1012 ntBASIC10.66□□□□□ -0.7
LINC01546A6NGU7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 AP000842.3-202ENST00000569238 1080 ntBASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC011498.7-201ENST00000624986 2027 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AL157414.3-201ENST00000624276 1954 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC131902.2-201ENST00000566892 2172 ntBASIC10.65□□□□□ -0.7
LINC01546A6NGU7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01546A6NGU7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms