Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 AC131902.2-201ENST00000566892 2172 ntBASIC16.55■□□□□ 0.24
CCDC66A2RUB6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 UXT-AS1-201ENST00000590504 1525 ntBASIC16.55■□□□□ 0.24
CCDC66A2RUB6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC66A2RUB6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 AL591122.2-201ENST00000624125 1853 ntBASIC16.54■□□□□ 0.24
CCDC66A2RUB6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 SLC25A39P2-201ENST00000537614 270 ntBASIC16.54■□□□□ 0.24
CCDC66A2RUB6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 RARRES2P9-201ENST00000565168 469 ntBASIC16.54■□□□□ 0.24
CCDC66A2RUB6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 AC023511.2-201ENST00000618803 211 ntBASIC16.54■□□□□ 0.24
CCDC66A2RUB6 C20orf181-201ENST00000623918 480 ntBASIC16.54■□□□□ 0.24
CCDC66A2RUB6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC66A2RUB6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 AC023024.2-201ENST00000623561 1993 ntBASIC16.53■□□□□ 0.24
CCDC66A2RUB6 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 MKNK2P1-201ENST00000437526 628 ntBASIC16.53■□□□□ 0.24
CCDC66A2RUB6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 AC069335.1-201ENST00000489972 472 ntBASIC16.53■□□□□ 0.24
CCDC66A2RUB6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 AC055717.3-201ENST00000622967 595 ntBASIC16.53■□□□□ 0.24
CCDC66A2RUB6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC66A2RUB6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms