Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 AC024909.3-201ENST00000611513 2257 ntBASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 AC090857.1-201ENST00000527400 390 ntBASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 NAP1L6-202ENST00000641404 1222 ntBASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC187A0A096LP49 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 RN7SKP214-201ENST00000364208 315 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AC010141.1-201ENST00000411585 623 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 RPL18P13-201ENST00000478088 569 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AL603832.2-201ENST00000566195 2125 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 MIR4783-201ENST00000580343 82 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 MIR5572-201ENST00000583188 137 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AC020922.3-201ENST00000595064 547 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AC138696.2-201ENST00000607376 223 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AC092127.1-201ENST00000567093 3455 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 AC063926.3-201ENST00000624734 5658 ntBASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC187A0A096LP49 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms