Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AC068587.3-201ENST00000526613 355 ntBASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 AC084364.1-201ENST00000551967 1556 ntBASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FNDC3AQ9Y2H6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AC005229.1-201ENST00000392885 409 ntBASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 TOMM22P5-201ENST00000416399 439 ntBASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 RPL7P3-201ENST00000441388 714 ntBASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 FO681548.1-201ENST00000455617 1132 ntBASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AP001889.1-201ENST00000525414 633 ntBASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 PTP4A1P2-201ENST00000546033 454 ntBASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AC015910.1-201ENST00000579400 975 ntBASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
FNDC3AQ9Y2H6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 AC112693.3-201ENST00000624819 1983 ntBASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 BCYRN1-201ENST00000418539 200 ntBASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 FAM21FP-201ENST00000426241 1131 ntBASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 AC124283.3-201ENST00000570869 594 ntBASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FNDC3AQ9Y2H6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms