Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 AC073310.1-201ENST00000423226 1033 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 AL442647.2-201ENST00000429864 857 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 VDAC1P7-201ENST00000462417 847 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 RWDD4P1-201ENST00000488019 565 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 AC093726.1-201ENST00000608064 963 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 AC087821.1-201ENST00000623639 567 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 FAM45BP-202ENST00000592932 1624 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 AL365209.1-201ENST00000624418 6473 ntBASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS9D1Q9Y2B5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 INTS4P2-202ENST00000614726 2019 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 CICP23-201ENST00000605013 2741 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AC134915.1-201ENST00000426461 574 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 FAM207CP-201ENST00000443486 507 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 KATNBL1P4-201ENST00000503545 918 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AL355385.1-201ENST00000606123 409 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 AL662799.1-202ENST00000614205 422 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SBF1P1-201ENST00000444527 5631 ntBASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS9D1Q9Y2B5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS9D1Q9Y2B5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms