Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4E1Q9UPM8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.75■□□□□ 0.11
AP4E1Q9UPM8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4E1Q9UPM8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 AC007686.3-201ENST00000619017 3487 ntBASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 AC093433.1-201ENST00000458048 571 ntBASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 KRT18P25-201ENST00000508931 1278 ntBASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 AC022616.1-201ENST00000518688 554 ntBASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 DUX4L47-201ENST00000566374 394 ntBASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 AC027307.3-201ENST00000594262 1100 ntBASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 AC018529.2-202ENST00000611482 3087 ntBASIC15.74■□□□□ 0.11
AP4E1Q9UPM8 LRRC59-203ENST00000576448 1531 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 AC023090.2-201ENST00000625182 2110 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 ACTBP8-201ENST00000403258 1108 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 AC022137.2-201ENST00000503482 481 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 AC009486.1-201ENST00000569860 813 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 MIR3197-201ENST00000582241 73 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 RPSAP52-203ENST00000622976 1023 ntBASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4E1Q9UPM8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 AC018442.1-201ENST00000421439 2061 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms