Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.27■□□□□ 0.51
DENND2AQ9ULE3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DENND2AQ9ULE3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DENND2AQ9ULE3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
DENND2AQ9ULE3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.27■□□□□ 0.51
DENND2AQ9ULE3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DENND2AQ9ULE3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AL109954.1-202ENST00000564051 2148 ntBASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AC018735.1-201ENST00000437208 1502 ntBASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DENND2AQ9ULE3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
DENND2AQ9ULE3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 AL354877.1-201ENST00000424412 413 ntBASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 MIR4683-201ENST00000579659 81 ntBASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.24■□□□□ 0.51
DENND2AQ9ULE3 INE2-201ENST00000630399 1874 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms