Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 AC009093.10-201ENST00000641956 1442 ntBASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NPC1L1Q9UHC9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 POM121L10P-201ENST00000436994 1285 ntBASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 AC005324.6-201ENST00000587972 613 ntBASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 AP000346.4-201ENST00000614827 381 ntBASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 AC113367.3-201ENST00000508316 1912 ntBASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.08■□□□□ 0.81
NPC1L1Q9UHC9 AC018735.1-201ENST00000437208 1502 ntBASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 BTBD6P1-201ENST00000412176 1267 ntBASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 ACTBP11-201ENST00000436287 1126 ntBASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 FAM58BP-201ENST00000439056 645 ntBASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 AC022447.6-201ENST00000515522 438 ntBASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 AC022748.3-201ENST00000621828 275 ntBASIC20.08■□□□□ 0.8
NPC1L1Q9UHC9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 REXO1L6P-201ENST00000603433 1515 ntBASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 AC005730.2-201ENST00000564549 1184 ntBASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 AC027601.3-201ENST00000622907 509 ntBASIC20.07■□□□□ 0.8
NPC1L1Q9UHC9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 MYADML-201ENST00000474610 2147 ntBASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 AC244394.1-201ENST00000435000 1665 ntBASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms