Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 AL355306.1-201ENST00000415580 579 ntBASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 KRT18P2-201ENST00000447938 1258 ntBASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
C12orf4Q9NQ89 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 FAM220BP-201ENST00000377689 816 ntBASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AC142381.1-201ENST00000426099 345 ntBASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 FAM86C2P-203ENST00000528684 1004 ntBASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AL135744.1-201ENST00000565098 629 ntBASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AC027307.2-201ENST00000591252 911 ntBASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AC026979.3-201ENST00000607315 403 ntBASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
C12orf4Q9NQ89 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms